CDS

Accession Number TCMCG019C08219
gbkey CDS
Protein Id XP_022936910.1
Location complement(join(6772296..6772382,6772779..6772847,6772923..6772989,6773124..6773191,6773414..6773524,6773649..6773706,6773802..6773838,6774209..6774302,6774518..6774583,6774689..6774753,6774870..6775014,6775132..6775197,6775511..6775660,6775836..6775905,6776180..6776256,6777770..6777838,6777927..6778010,6778850..6778893,6779022..6779162,6779245..6779443,6780141..6780269,6780432..6780515,6780721..6780834,6781501..6781608,6781700..6781795,6781978..6782046,6782220..6782321,6782475..6782570,6782717..6782800,6783316..6783433,6783514..6783590,6784007..6784195,6784288..6784535,6784916..6785066,6785711..6785827,6786232..6786339,6786444..6786543,6786698..6786771,6787636..6787680))
Gene LOC111443358
GeneID 111443358
Organism Cucurbita moschata

Protein

Length 1291aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA418582
db_source XM_023081142.1
Definition Niemann-Pick C1 protein-like isoform X1 [Cucurbita moschata]

EGGNOG-MAPPER Annotation

COG_category I
Description Niemann-Pick C1
KEGG_TC 2.A.6.6
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K12385        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04979        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04979        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005496        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006869        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008202        [VIEW IN EMBL-EBI]
GO:0008206        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010876        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015485        [VIEW IN EMBL-EBI]
GO:0015850        [VIEW IN EMBL-EBI]
GO:0015918        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030301        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032934        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042632        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043178        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055088        [VIEW IN EMBL-EBI]
GO:0055092        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGGCTCCGTTTGGGGTTTATCGCGTCAATTTATCTCCTCCAGGTTCTATATTTTGTCCTAGCGTATGCAGAGAGGTCTAACATACGGTTGCTGTTATCTACGAATGGCACATCAGGGGAAAAACATTCTGAAGGATATTGCACAATGTATGGTATCTGTGGAAAACGACCTGATGGTAAGGTGTTGAACTGTCCGACTGGTACCCCATCTGTGCAGCCAGACAATCTTCTTTCATCAAAGATTCAAAGTCTATGTCCAACTATTACTGGCAATGTTTGTTGCACAGAAGAACAATTTGACACCCTACGATCACAAGTTATGCAGGCTATTCCGTTTCTTGTTGGTTGTCCAGCATGCTTAAGAAACTTTTTGAACCTATTCTGTGAGCTTACCTGTTCTCCAAATCAGAGCTTATTCATTAATGTAACTTCTGTTTTAAAGGTTAATAGCAGCCTTACAGTTGATGCCATTGATTATTATGTAGCTGATGCTTTTGGTGAAGGACTATTTGAGTCCTGCAAAGATGTAAAATTTGGTACGATGAACACACGAGCCATGCAATTTATTGGTGCTGGTGCTCAAAATTTCAAAGAGTGGTTTGCTTTTATCGGTAAACGAGCTAGTCCTAGCATGCCTGGTTCACCATATGCTATTGGATTTCCCTCTACCATGTCTGAGTCATCTGGAATGAAGCATATGAATGTATCGGCTTATTCTTGTGGAGATACTTCACTAGGATGTTCCTGTGGTGATTGCCCTTCAGCTCCCGTCTGCAGTAGTACTTCAACCCCCGTTTTCCATAGAAAAAATTCTTGTTCAGTGAGAATTGGGTCTCTCAAGGTCAAATGTGTCGACTTCGCTCTGTGTATCCTATACATTATAATTGCCTCTGCTTTTCTTGGATGGAGTTTGTTTTATCGCAAATCTCAAAAGAGCCCTTCTTCGGGAACTAAAACAATGCCGAATATTATGGATGGTAGCAGTCTCCATTCTGCTACTAGGCAAAAGGATGAAAGTTTGCCAATGCAGATGCTTGAAGATGCTCCTCAAATCAGAAGTAGGATTCAGCTTTCAGTTGTCCAGGGATACATGTCCAATTTTTATAGGAAATATGGGAAATGGGTGGCTAGAAATCCAACATTGGTGTTGATTTCATCACTCGCCATTGTTCTTCTTCTGTGTTTAGGCCTCATTCGTTTCAAGGTGGAGACAAGGCCTGAGAAGCTATGGGTAGGACCAGGAAGCAGAGCATCCCAAGAGAAGGAATTTTTTGACACACATTTAGCCCCTTTTTATAGGATTGAACAGATTATAATAGCCACAGTTCCAGATACTGAGCACGGAAAGCCGCCAAGTATTTTGAATGATAACAATGTTAAGTTACTGTTTGGCATACAAAAGAAGATAGATGGTATTCGAGCTAATTATTCTGGTTCAAGTGTATCTCTAAATGACATTTGCTTGAAGCCATTGGATCGTGATTGTGCCACCCAGAGTGTCCTGCAGTATTTCCAGATGAATCCAGAAAATTTTGATAACTATGGAGGAGTCGAACACCTTGAATATTGTTTTGAGCATTACTCCTCTGCAGACAGTTGCAGGAGTGCATTTAAAGCTCCTCTTGATCCAAGCACCGCATTAGGGGGATACTCTGGGAACAATTATTCAGAAGCTTCTGCGTTCTTAATAACTTATCCAGTGAATAATGCTATTAATAAAGAAGGGAATGAATCTGGTCGAGCTGTGGCTTGGGAGAAAGCCTTCATTCAGTTGGCTAAGACCGAGTTATTGACAATGGTGCAATCTCAAAATTTGACGCTTTCTTTTTCTTCGGAAAGTTCCATTGAAGAAGAATTAAAAAGAGAGAGTACTGCTGATGTCATCACAATCTTGATAAGCTATCTTGTGATGTTTGCTTACATATCTCTTACTCTGGGCGATAGACCACATTTATCTACTTTTTTTGTTTCATCAAAGGTGTTACTTGGTCTCTCCGGAGTTGTTCTTGTCATGTTGTCTGTTCTTGGATCAGTCGGGTTTTTCAGTGCAATTGGAGTCAAATCTACTCTAATCATTATGGAAGTTATCCCTTTCCTTGTTCTGGCAGTTGGAGTGGATAACATGTGTATATTGGTACATGCTGTTAAACGGCAGTCAGTAGAATTGCCTTTAGAAGGACGAATTAGCAATGCGCTCGTAGAAGTTGGACCATCCATAACACTAGCAAGTTTATCTGAGGTTCTTGCATTTGCAGTTGGAAGTTTCATTCCTATGCCAGCATGCCGTGTCTTTTCCATGTTTGCAGCATTGGCCGTTCTTCTGGACTTCCTGCTGCAAGTTACAGCTTTTGTTGCTCTCATAGTATTTGATTTCTTAAGAACTGAGGATAAGAGAGTTGATTGTTTTCCGTGTATTAAGAACTCAGGATATGCTGGAAGTGATAAAGGCATCACTCAGAGGAATCCTGGCTTGTTAGCCCGATACATGAAGGAGATCCATGCCCCTGTGCTTAGCATCTGGGGAGTCAAAATAGTTGTCATATCCATCTTTGTTGGGTTCACATTGGCAAGCATTGCACTATGCACCAGAATTGAAGCTGGTTTGGAACAAAAGATTGTCCTCCCCAAAGATTCTTATCTCCAGGGGTACTTCAATAACATTTCTGAACATCTCAGAATAGGTGCACCAGTATACTTCGTTGTAAAGAACTACAATTATAGCTCAGACTCAAGACAGACAAACCAATTATGCTCCATCAGTCAATGTGACTCAAACTCTCTTTTAAATGAGATTGCAAAAGCTTCACTAATACCAGAGTCAAGTTACATTGCTAAACCAGCTGCTTCATGGCTTGATGATTATCTTGTGTGGATATCTCCAGAAGCATTTGGATGTTGTCGGAAGTTCACGAATGGGAGCTATTGCCCCCCTGATGATCAGGCCCCTTGCTGTGCTTCTAATGGTGGTTCTTGTGGTCTGAATGGAGTATGCAAAGATTGTACAACGTGCTTTCTTCACTCGGATCTGCATGGTGGTAGGCCATCCACTACACAATTTAAGGAGAAATTGCCATGGTTCCTCAGTGCTCTACCTTCTGCTGATTGTGCTAAAGGAGGTCATGGGGCATACACTAGTAGTGTTGAACTGAAAGGCTATGAAAATGGTGTTATTCAAGCATCTTCTTTCAGAACATACCATACTCCCCTGAATAAGCAGGTTGACTATATTAATTCGATGAGGGCTGCTCAAGAATTGAGTTCAAGGGTTTCTGATTCTTTGAAGATAGAAGTCTTTCCGTATTCTGTATTTTACATGTTTTTTGAGCAATACCTCAATATATGGAGAACAGCACTGATCAACCTTGCCATCGCTATTGGTGCGGTGTTTATTGTGTGTCTGATCATCACATGCAGCTTATGGACCTCGGCTATCATCTTGTTGGTGTTGGCAATGATTGTTGTGGATCTCATGGGCGTGATGGCAATTTTGAATATCCAATTGAACGCAATCTCTGTTGTCAATCTTGTCATGTCTGTGGGAATTGCTGTTGAATTTTGTGTGCATTTGACACATGCTTTCTCGGTTAGCAGTGGAGATAAAGACCAACGCATGAAGGAGGCTCTCAGTACAATGGGAGCATCTGTCCTTAGTGGAATCACACTAACGAAGCTAGTCGGGGTCCTTGTACTTTGCTTCTCCAGGACTGAAGTTTTTGTGGTTTATTATTTCAAAATGTACTTGGCACTAGTACTTCTTGGATTTTTGCATGGTCTCGTATTCTTGCCGGTAGTGTTGAGCTTGCTCGGTCCACCTTCAAGATGTGTGTTCGTCGAGCAACAGGACAATCGGCCCTCTACTTCGTCTCGGTCATGA
Protein:  
MRLRLGFIASIYLLQVLYFVLAYAERSNIRLLLSTNGTSGEKHSEGYCTMYGICGKRPDGKVLNCPTGTPSVQPDNLLSSKIQSLCPTITGNVCCTEEQFDTLRSQVMQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVLKVNSSLTVDAIDYYVADAFGEGLFESCKDVKFGTMNTRAMQFIGAGAQNFKEWFAFIGKRASPSMPGSPYAIGFPSTMSESSGMKHMNVSAYSCGDTSLGCSCGDCPSAPVCSSTSTPVFHRKNSCSVRIGSLKVKCVDFALCILYIIIASAFLGWSLFYRKSQKSPSSGTKTMPNIMDGSSLHSATRQKDESLPMQMLEDAPQIRSRIQLSVVQGYMSNFYRKYGKWVARNPTLVLISSLAIVLLLCLGLIRFKVETRPEKLWVGPGSRASQEKEFFDTHLAPFYRIEQIIIATVPDTEHGKPPSILNDNNVKLLFGIQKKIDGIRANYSGSSVSLNDICLKPLDRDCATQSVLQYFQMNPENFDNYGGVEHLEYCFEHYSSADSCRSAFKAPLDPSTALGGYSGNNYSEASAFLITYPVNNAINKEGNESGRAVAWEKAFIQLAKTELLTMVQSQNLTLSFSSESSIEEELKRESTADVITILISYLVMFAYISLTLGDRPHLSTFFVSSKVLLGLSGVVLVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQSVELPLEGRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQVTAFVALIVFDFLRTEDKRVDCFPCIKNSGYAGSDKGITQRNPGLLARYMKEIHAPVLSIWGVKIVVISIFVGFTLASIALCTRIEAGLEQKIVLPKDSYLQGYFNNISEHLRIGAPVYFVVKNYNYSSDSRQTNQLCSISQCDSNSLLNEIAKASLIPESSYIAKPAASWLDDYLVWISPEAFGCCRKFTNGSYCPPDDQAPCCASNGGSCGLNGVCKDCTTCFLHSDLHGGRPSTTQFKEKLPWFLSALPSADCAKGGHGAYTSSVELKGYENGVIQASSFRTYHTPLNKQVDYINSMRAAQELSSRVSDSLKIEVFPYSVFYMFFEQYLNIWRTALINLAIAIGAVFIVCLIITCSLWTSAIILLVLAMIVVDLMGVMAILNIQLNAISVVNLVMSVGIAVEFCVHLTHAFSVSSGDKDQRMKEALSTMGASVLSGITLTKLVGVLVLCFSRTEVFVVYYFKMYLALVLLGFLHGLVFLPVVLSLLGPPSRCVFVEQQDNRPSTSSRS